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      Gene-editing tool gets its inevitable Nobel

      John Timmer • news.movim.eu / ArsTechnica • 7 October, 2020 • 1 minute

    Emmanuelle Charpentier reminds everybody about pandemic safety at the start of a press conference following the announcement of her Nobel Prize.

    Enlarge / Emmanuelle Charpentier reminds everybody about pandemic safety at the start of a press conference following the announcement of her Nobel Prize. (credit: Pictures Alliance/Getty Images)

    On Wednesday, the Nobel Prize Committee awarded the Chemistry Nobel to Emmanuelle Charpentier and Jennifer Doudna, who made key contributions to the development of the CRISPR gene-editing system, which has been used to produce the first gene-edited humans. This award may spur a bit of controversy, as there were a lot of other contributors to the development of CRISPR (enough to ensure a bitter patent fight), and Charpentier and Doudna's work was well into the biology side of chemistry. But nobody's going to argue that the gene editing wasn't destined for a Nobel Prize.

    Basic science

    The history of CRISPR gene editing is a classic story of science: a bunch of people working in a not-especially-cutting-edge area of science found something strange. The "something" in this case was an oddity found in the genome sequences of a number of bacteria. Despite being very distantly related, the species all had a section of the genome where a set of DNA sequences were repeated, with a short spacer in between them. The sequences picked up the name CRISPR for "clustered regularly interspaced short palindromic repeats," but nobody knew what they were doing there.

    The fact that they might be important became apparent when researchers recognized that bacteria that had CRISPR sequences invariably also had a small set of genes associated with them. Since bacteria tended to rapidly lose genes and repeat sequences that weren't performing useful functions, this obviously implied some sort of utility. But it took 18 years for someone to notice that the repeated sequences matched those found in the genomes of viruses that infected the bacteria.

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      Studying clay-pot residues could help scientists recreate ancient recipes

      Jennifer Ouellette • news.movim.eu / ArsTechnica • 29 September, 2020 • 1 minute

    Two rows of simply black pots.

    Enlarge / Seven La Chamba unglazed ceramic pots were used in a yearlong cooking experiment analyzing the chemical residues of the meals prepared. (credit: Melanie Miller )

    Archaeologists are fascinated by many different aspects of cultures in the distant past, but determining what ancient people cooked and ate can be particularly challenging. A team of researchers spent an entire year analyzing the chemical residues of some 50 meals cooked in ceramic pots and found such cookware retained not just the remnants of the last meal cooked, but also clues as to earlier meals, spanning a pot's lifetime of usage. This could give archaeologists a new tool in determining ancient diets. The researchers described their results in a recent paper published in the journal Scientific Reports.

    According to co-author Christine Hastorf , an archaeologist at the University of California, Berkeley (UCB), the project has been several years in the making. Hastorf has long been interested in the relationships between people and plants throughout history, particularly as they pertain to what people ate in the past. Back in 1985, she co-authored a paper examining the isotopes of charred plant remains collected from the inside of pots. She has also long taught a food archaeology class at UCB. A few years ago, she expanded the course to two full semesters (nine months), covering both the ethnographic aspects as well as the archaeological methods one might use to glean insight into the dietary habits of the past.

    The class was especially intrigued by recent molecular analysis of pottery, yet frustrated by the brevity of the studies done to date on the topic. Hastorf proposed conducting a longer study, and her students responded enthusiastically. So they devised a methodology, assigned research topics to each student, and located places to purchase grain (maize and wheat from the same region of the Midwest), as well as receiving venison in the form of donated deer roadkill. She even bought her own mill so they could grind the grains themselves, setting it up in her home garage.

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      Could “disordered rock salts” bring order to next-gen lithium batteries?

      John Timmer • news.movim.eu / ArsTechnica • 4 September, 2020 • 1 minute

    Image of a large crystal of salt.

    Enlarge / Ordered rock crystals, courtesy of a salt mine. (credit: Lech Darski )

    Better batteries are a critical enabling technology for everything from your gadgets all the way up to the stability of an increasingly renewable grid. But most of the obvious ways of squeezing more capacity into a battery have been tried, and they all run straight into problems. While there may be ways to solve those problems, they're going to need a lot of work to overcome those hurdles.

    Earlier this week, a paper covers a new electrode material that seems to avoid the problems that have plagued other approaches to expanding battery capacity. And it's a remarkably simple material: a variation on the same structure that's formed by crystals of table salt. While it's far from being ready to throw in a battery, the early data definitely indicate it's worth looking into further.

    Lithium density

    Lithium-ion batteries, as their name implies, involve shuffling lithium between the cathode and the anode of the battery. The consequence of this is that both of the electrodes will end up needing to store lithium atoms . So most ideas for next-generation batteries involve finding electrode materials that do so more effectively.

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      The chemistry of what makes sour beer so sour

      Jennifer Ouellette • news.movim.eu / ArsTechnica • 24 August, 2020 • 1 minute

    Scientists report progress on a study of how acids and other flavor components evolve while sour beer ages.

    Sour beer has been around for centuries, and has become a favorite with craft brewers in recent years. But the brewing process can be unpredictable. To help brewers better understand how sour beers develop their distinctive complex flavors, chemists at the University of Redlands in California have been tracking various chemical compounds that contribute to those flavor profiles, monitoring how their concentrations change over time during the aging process. They presented their initial findings during the American Chemical Society's Fall 2020 Virtual Meeting & Expo last week.

    Goses, lambics, and wild ales, oh my!

    Brewers of standard beer carefully control the strains of yeast they use, taking care to ensure other microbes don't sneak into the mix, lest they alter the flavor during fermentation. Sour beer brewers use wild yeasts , letting them grow freely in the wort, sometimes adding fruit for a little extra acidity. Then the wort is transferred to wooden barrels and allowed to mature for months or sometimes years, as the microbes produce various metabolic products that contribute to sour beer's unique flavor. But the brewers don't always know exactly which compounds end up in the final product or how it will impact the overall flavor profile. "That is the quandary of the sour beer brewer," said co-author David Soulsby during a virtual press conference .

    "Sour beer tastes very different from regular beer, but it's a very complex and rich flavor experience. These different flavors come from the complex processes that are occurring during aging," said co-author Teresa Longin, who also happens to be married to Soulsby. "These processes are hard to control and can be hard to reproduce. Our research focuses on understanding what these processes are, what's happening over time, so that the brewer can ultimately understand them and make better beer."

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      Will lithium-sulfur batteries be in our future?

      John Timmer • news.movim.eu / ArsTechnica • 10 January, 2020 • 1 minute

    Monash University Associate Professor Matthew Hill, Dr. Mahdokht Shaibani, and Professor Mainak Majumder with the lithium-sulphur battery design.

    Monash University Associate Professor Matthew Hill, Dr. Mahdokht Shaibani, and Professor Mainak Majumder with the lithium-sulphur battery design. (credit: Monash University)

    The name "lithium-ion battery" seems to imply that lithium is the essential ingredient that dictates the battery's performance characteristics. But that's less true than it appears. The electrodes that the lithium shuttles between are critical for dictating a battery's performance, which is why electrode materials played such a large role in the description of last year's Chemistry Nobel . Different electrode materials dictate the battery's performance in part based on dictating the energy difference between the charged and uncharged state. But they also determine how much lithium can be stored at an electrode, and through that the energy density of a battery.

    There are a number of ideas floating around for new electrode materials that store lithium in fundamentally different ways: as solid lithium metal or as lithium oxide, which allows some of the electrode material to come from the air outside the battery. There are also chemicals that can store much more lithium per given area of volume. All of these options present serious issues (often more than one) that have kept them from being adopted so far. But a recent paper is promising a major breakthrough in something that's always been an attractive option for lithium storage: sulfur.

    Alternate electrodes

    "Holds lots of lithium" isn't a high bar to clear; if that was all we were looking for, some of these alternative electrode materials would be in use already. But there's a whole host of other characteristics: cheap and easy to work with, compatible with the chemistry of the rest of the battery components, holds up to repeated charge cycles, and so on.

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